CDS

Accession Number TCMCG051C36694
gbkey CDS
Protein Id XP_024439758.1
Location join(1238645..1238777,1238867..1238958,1239079..1239211,1239310..1239364,1239554..1240244,1240370..1240699,1241130..1241594,1241696..1241768,1242148..1242233,1242928..1243047,1243203..1243273,1243558..1243657)
Gene LOC7473273
GeneID 7473273
Organism Populus trichocarpa

Protein

Length 782aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024583990.1
Definition lysine-specific demethylase JMJ25 isoform X4 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description response to cisplatin
KEGG_TC -
KEGG_Module M00177        [VIEW IN KEGG]
M00179        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE br01610        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03011        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K02987        [VIEW IN KEGG]
ko:K15601        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03010        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
map03010        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
GOs GO:0000785        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006482        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008214        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016577        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031490        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032451        [VIEW IN EMBL-EBI]
GO:0032452        [VIEW IN EMBL-EBI]
GO:0032454        [VIEW IN EMBL-EBI]
GO:0033169        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070076        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAAGCACCGATGCTTCTGAAGACACTGGTGGGCAAACTTGTCATCAGTGCCGGAGGAATGACAGAAATAGTGTTACTTGGTGTCTCAAATGTGACAAGAGAGGTTTTTGTGATAGCTGTATCTCAGAATGACATTCCATTAGAAGAAATTGAGAAGGTTTGTCCTGCATGTCGCGGGATCTGCAATTGCAGGGGTTGCTTACGAGGAGATAATATGGTAAAGGTAAGAATACGGGAAATACCTGTTCTTGACAAGTTGCAATATCTCCACTGCCTATTATCTTCAGTGCTTCCTATAGTTAAGCAGATCCATCAAGAACAATGCTTTGAAGTAGAGCTTGAACAAAGGCTGCGTGGAACTGATATAGATCTTGTCCGGGCCAAATTGAATGCAGATGAGCAGATGTGCTGCAATATATGTAGGATACCCATTATTGATTATCATCGGCATTGTGCAAATTGCTCGTATGATCTGTGCCTTCATTGCTGTCAAGATCTTCGAGGAGCATCTAAACATGGTGTTGAAAATGAAGTGGATGATAATCAGATTGATGGGAGAAGTCAAGACAATGAGACTCCATTAGAACCAGTGAGAGAACCACAAGTAAGACTAAAGTTATCAGATAAGTACCAAGGCTGGAAGGCAAACAATGATGGCAGTATTCCATGCCCTCCGAAGGAGCACGGTGGTTGTAATTACTCATCATTGAACCTAAGCCGTATTTTCAAGATGAATTGGGCAGCAAAACTTGTGAAAAATGTGGAGGAAATGGTCAGTGGCTGTAAGGTTTATGATGCTGGCACCCCACAGAAATCCAGGTTGAATGATTCCACACTCTGCCAGTATGCTCACAGAGAGGACAGTGATGATAATTTCTTATATTGCCCCTTATCTGAAGATGTAAAAGCTGATGGGATAAACAAGTTTAGAAAACACTGGGTTCGAGGTGAACCTGTTATTGTGAAGCAGGTATTTGACAGCTCATCCATATCAAGCTGGGATCCAATGGCTATTTGGAGGGGGATCCGGGAAACATCAGATGAGAAAAAGAAAGGTGAAAACAGAATGGTGAAGGCCATAGATTGCTTACACTGGTCTGAGGTTGATATTGATCTTGATCAGTTTATCCGAGGATACTCAGAGGGACGAATCAGGGAAAATGGTTCACCAGAGATGTTGAAGTTGAAGGATTGGCCTTCCCCCAGTGCTTCTGAAGAGTTCTTATTATACCAGAGACCTGAATCTATCAGTAAACTGCCTTTCCTCGAATTTATCCATTCAAGGGTGGGTGTTCTAAATGTTGCTGCAAAGTTGCCTCATTACTCTTTGCAGAATGATGTAGGACCCAAGATTTGTATATCTTATGGGAGCCATGAGGATCTCGGTGTGGGTGATTCTGTAATCAAACTTCATTTCAAAACGCGTGACATGGTGTATCTATTGGTGCATACATGCGAAGCAAAGACAAAAGGTAGCCAGGAGAGTAGCTCAATTGACCCAGAAAAAAGCTTGGATGATGGAAGGTTGCCTGATATATCACTCGATGGGCATGATATACAAGATGAAGTGAAGACAGCTGCAGATAAGGATGAGAAAATGGAGGATCAAGAGGTTGCTAATACCACTAGTATTGAAGAGATTGACAGAATTGAAGATCATGGGGCTGAAAGAATCACAGGTGTTCAAGAGGTTGAAAGAATGGAAACCACCAGAGTGGAAGAGGTTGAGGGAATGGAGGATCAGCAGTTTAAGAAAGATAGTGAAGATATCCCTGTAGAGGTTTGTCCAGGAGTTAGTTGGGATGTCTTTCGTCGGCAGGATATTCCAAAGTTAATTGATTATTTGAGAACATGCTATAAGGACCTTTGGAAGCCTGACAACATAGTGAATGATTTTGTCACAGATCCCCTTTATGACGGAACAGTTTTCCTAAATGCGTTTCATAAGAGACAATTGAAGGAAGAGTTTGGAGTTGAACCATGGTCATTTGAACAACATTTGGGGCAAGCTGTATTCGTCCCAGCTGGATGCCCTTTCCAAGCGAGGAATCTTCAGTCCAATGTTCAGTTGGGCCTTGATTTCTTATCTCCTGAAAGTCTGGGGGTGTCTGCTAGATTGGCAGAAGAAATTCGCTGTCTTCCAAATGACCATGAAGCAAAACTTCAAGTTTTGGAGGTGGGTAAGATGTCACTCTATGCTGCTAGTTCAGCCATTAAAGAAGTCCAGAAATTGGTGCTTGATCCTAAACTTGGTGCTGAAATTGGATTCGAGGATCGCAATTTAACTGCAGCAGTTGCTGAGAACTTGGAGAAAGGTGCTAAGCCAAGACAGATAAGTTGTTCTTAA
Protein:  
MQAPMLLKTLVGKLVISAGGMTEIVLLGVSNVTREVFVIAVSQNDIPLEEIEKVCPACRGICNCRGCLRGDNMVKVRIREIPVLDKLQYLHCLLSSVLPIVKQIHQEQCFEVELEQRLRGTDIDLVRAKLNADEQMCCNICRIPIIDYHRHCANCSYDLCLHCCQDLRGASKHGVENEVDDNQIDGRSQDNETPLEPVREPQVRLKLSDKYQGWKANNDGSIPCPPKEHGGCNYSSLNLSRIFKMNWAAKLVKNVEEMVSGCKVYDAGTPQKSRLNDSTLCQYAHREDSDDNFLYCPLSEDVKADGINKFRKHWVRGEPVIVKQVFDSSSISSWDPMAIWRGIRETSDEKKKGENRMVKAIDCLHWSEVDIDLDQFIRGYSEGRIRENGSPEMLKLKDWPSPSASEEFLLYQRPESISKLPFLEFIHSRVGVLNVAAKLPHYSLQNDVGPKICISYGSHEDLGVGDSVIKLHFKTRDMVYLLVHTCEAKTKGSQESSSIDPEKSLDDGRLPDISLDGHDIQDEVKTAADKDEKMEDQEVANTTSIEEIDRIEDHGAERITGVQEVERMETTRVEEVEGMEDQQFKKDSEDIPVEVCPGVSWDVFRRQDIPKLIDYLRTCYKDLWKPDNIVNDFVTDPLYDGTVFLNAFHKRQLKEEFGVEPWSFEQHLGQAVFVPAGCPFQARNLQSNVQLGLDFLSPESLGVSARLAEEIRCLPNDHEAKLQVLEVGKMSLYAASSAIKEVQKLVLDPKLGAEIGFEDRNLTAAVAENLEKGAKPRQISCS